Database download

Database download of current and previous versions

Full database download

Diat.barcode logo © Mihail Zhelyazkov & INRAE

The following link gives you access to the files of the different database versions (DOI):

https://data.inrae.fr/dataset.xhtml?persistentId=doi:10.15454/TOMBYZ

  • 2022-05-25: Diat.barcode v11.1
  • 2021-06-25: Diat.barcode v10.1
  • 2020-11-13: Diat.barcode v9.2 (addition of Omnidia codes and update of global alignment for rbcL)
  • 2020-10-09: Diat.barcode v9.1, internal version, not available for download
  • 2020-09-14: Diat.barcode v9
  • 2020-06-10: Diat.barcode v8.1 (minor corrections from v.8)
  • 2020-01-01: Diat.barcode v8 
  • 2019-02-12: Diat.barcode v7.1 (corrections of minor errors in the ecological data (biovolumes, lifes forms, ecological guilds). No addition of DNA sequences, no modification of taxonomical names)
  • 23-02-2018: Diat.barcode v7
  • 20-03-2017: R-Syst::diatom v6
  • 18-02-2016: R-Syst::diatom v5
  • 16-09-2015: R-Syst::diatom v4
  • 13-02-2015: R-Syst::diatom v3
  • 16-09-2014: R-Syst::diatom v2
  • 28-11-2012: R-Syst::diatom v1

Rimet, Frederic; Chonova, Teofana; Gassiole, Gilles; Gusev, Evgenuy; Kahlert, Maria; Keck, François; Kelly, Martyn; Kochoska, Hristina; Kulikovskiy, Maxim; Levkov, Zlatko; Maltsev, Yevhen; Mann, David; Pfannkuchen, Martin; Trobajo, Rosa; Vasselon, Valentin; Wetzel, Carlos; Zimmermann, Jonas; Bouchez, Agnès, 2018, "Diat.barcode, an open-access barcode library for diatoms", https://doi.org/10.15454/TOMBYZ, Portail Data INRAE

Phenotypic and ecological data given in Diat.barcode come from:

Rimet F. & Bouchez A., 2012. Life-forms, cell-sizes and ecological guilds of diatoms in European rivers. Knowledge and management of aquatic ecosystems, 406: 1-14. DOI: 10.1051/kmae/2012018

Full access to this paper : https://data.inra.fr/dataset.xhtml?persistentId=doi:10.15454/XLQ40G

Date de modification : 26 avril 2023 | Date de création : 11 décembre 2018 | Rédaction : F Rimet