Database citation

Database citation

Database citation

Diat.barcode logo © Mihail Zhelyazkov & INRAE

When using the database please give at least the most recent citation :

  • Maria Mercedes  Nicolosi Gelis, Raphaëlle  Barry-Martinet, Jean-François  Briand, Teofana  Chonova, Joaquín  Cochero, Gilles  Gassiole, Maria  Kahlert, Balasubramanian  Karthick, François  Keck, Martyn  Kelly, Hristina  Kochoska, David  Mann, Pratyasha  Nayak, Martin  Pfannkuchen, Tobias  Servulo, Rosa  Trobajo, Valentin  Vasselon, Danijela  Vidakovic, Laurine  Viollaz, Carlos  Wetzel, Jonas  Zimmermann, Frederic  Rimet, (2025) Assigning taxonomy and traits to DNA sequences of river diatoms in a region with limited taxonomic knowledge using the updated and annotated reference library Diat.barcode. Int. J. Lim. 61 10 DOI: DOI: https://doi.org/10.1051/limn/2025009
  • Rimet F., Gusev E., Kahlert M., Kelly M., Kulikovskiy M., Maltsev Y., Mann D., Pfannkuchen M., Trobajo R., Vasselon V., Zimmermann J., Bouchez A., 2019. Diat.barcode, an open-access curated barcode library for diatoms. Scientific Reports. https://www.nature.com/articles/s41598-019-51500-6
  • Rimet, Frederic; Barry-Martinet, Raphaëlle; Briand, Jean-François; Chonova, Teofana; Gassiole, Gilles; Gusev, Evgenuy; Kahlert, Maria; Karthick, Balasubramanian; Keck, François; Kelly, Martyn; Kochoska, Hristina; Kulikovskiy, Maxim; Levkov, Zlatko; Maltsev, Yevhen; Mann, David; Nayak, Pratyasha; Nicolosi Gelis, Maria Mercedes; Pfannkuchen, Martin; Trobajo, Rosa; Vasselon, Valentin; Vidakovic, Danijela; Viollaz, Laurine; Wetzel, Carlos; Zimmermann, Jonas; Bouchez, Agnès, 2018, "Diat.barcode, an open-access barcode library for diatoms", https://doi.org/10.15454/TOMBYZ, Recherche Data Gouv, V21
  • Frederic Rimet; Philippe Chaumeil; Francois Keck; Lenaïg Kermarrec; Valentin Vasselon; Maria Kahlert; Alain Franc; Agnes Bouchez. 2016. R-Syst::diatom: an open-access and curated barcode database for diatoms and freshwater monitoring. Database, 2016, 1-21.http://database.oxfordjournals.org/content/2016/baw016.full?keytype=ref&ijkey=H324uA95JzzEomz
  • Rimet F., Chaumeil P., Keck F., Kermarrec L., Vasselon V., Kahlert M., Franc A., Bouchez A., 2015. R-Syst::diatom: a barcode database for diatoms and freshwater biomonitoring - data sources and curation procedure. INRA Report, 14 pages http://dx.doi.org/10.5281/zenodo.31137